:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r-acidplots' .. highlight: bash r-acidplots =========== .. conda:recipe:: r-acidplots :replaces_section_title: :noindex: Functions for plotting genomic data. :homepage: https://r.acidgenomics.com/packages/acidplots/ :developer docs: https://github.com/acidgenomics/r-acidplots :license: GPL / AGPL-3.0 :recipe: /`r-acidplots `_/`meta.yaml `_ .. conda:package:: r-acidplots |downloads_r-acidplots| |docker_r-acidplots| :versions: .. raw:: html
0.7.3-00.7.2-00.7.1-00.6.1-00.6.0-00.5.5-20.5.5-10.5.5-00.5.4-1 ``0.7.3-0``,  ``0.7.2-0``,  ``0.7.1-0``,  ``0.6.1-0``,  ``0.6.0-0``,  ``0.5.5-2``,  ``0.5.5-1``,  ``0.5.5-0``,  ``0.5.4-1``,  ``0.5.4-0``,  ``0.5.3-1``,  ``0.5.3-0``,  ``0.4.0-0``,  ``0.3.9-0``,  ``0.3.8-0``,  ``0.3.7-0``,  ``0.3.5-2``,  ``0.3.5-1``,  ``0.3.5-0``,  ``0.3.0-0``,  ``0.2.36-0``,  ``0.2.35-0``,  ``0.2.34-0``,  ``0.2.32-0``,  ``0.2.30-0``,  ``0.2.29-0``,  ``0.2.28-0``,  ``0.2.27-0``,  ``0.2.26-1``,  ``0.2.26-0``,  ``0.2.24-0``,  ``0.2.23-0``,  ``0.2.22-0``,  ``0.2.20-0``,  ``0.2.19-0``,  ``0.2.18-0``,  ``0.2.17-0``,  ``0.2.16-0``,  ``0.2.15-0``,  ``0.2.14-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.60.0`` :depends bioconductor-biocgenerics: ``>=0.46.0`` :depends bioconductor-dropletutils: ``>=1.20.0`` :depends bioconductor-iranges: ``>=2.34.0`` :depends bioconductor-s4vectors: ``>=0.38.0`` :depends bioconductor-singlecellexperiment: ``>=1.22.0`` :depends bioconductor-summarizedexperiment: ``>=1.30.0`` :depends r-acidbase: ``>=0.7.0`` :depends r-acidcli: ``>=0.3.0`` :depends r-acidexperiment: ``>=0.5.0`` :depends r-acidgenerics: ``>=0.7.1`` :depends r-acidgenomes: ``>=0.6.0`` :depends r-acidmarkdown: ``>=0.3.0`` :depends r-acidplyr: ``>=0.5.0`` :depends r-acidsinglecell: ``>=0.4.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-complexupset: ``>=1.3.3`` :depends r-ggplot2: ``>=3.4.3`` :depends r-ggpmisc: ``>=0.5.4`` :depends r-ggrepel: ``>=0.9.3`` :depends r-ggridges: ``>=0.5.4`` :depends r-goalie: ``>=0.7.1`` :depends r-matrix: ``>=1.6.1`` :depends r-matrixstats: ``>=1.0.0`` :depends r-patchwork: ``>=1.1.3`` :depends r-pheatmap: ``>=1.0.12`` :depends r-pipette: ``>=0.14.0`` :depends r-rcolorbrewer: ``>=1.1.3`` :depends r-rlang: ``>=1.1.1`` :depends r-scales: ``>=1.2.1`` :depends r-syntactic: ``>=0.7.0`` :depends r-viridis: ``>=0.6.4`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install r-acidplots and update with:: mamba update r-acidplots To create a new environment, run:: mamba create --name myenvname r-acidplots with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/r-acidplots: (see `r-acidplots/tags`_ for valid values for ````) .. |downloads_r-acidplots| image:: https://img.shields.io/conda/dn/bioconda/r-acidplots.svg?style=flat :target: https://anaconda.org/bioconda/r-acidplots :alt: (downloads) .. |docker_r-acidplots| image:: https://quay.io/repository/biocontainers/r-acidplots/status :target: https://quay.io/repository/biocontainers/r-acidplots .. _`r-acidplots/tags`: https://quay.io/repository/biocontainers/r-acidplots?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-acidplots/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r-acidplots/README.html