:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r-gwpcr' .. highlight: bash r-gwpcr ======= .. conda:recipe:: r-gwpcr :replaces_section_title: :noindex: Implements the necessary distributions and parameter estimation procedures for a model of amplification and high\-troughput sequencing. The model is based on a mechanistic model of PCR amplification as a Galton\-Watson branching process\, and on Poissonan sampling to model high\-throughput sequencing. :homepage: http://www.cibiv.at/~pflug_/trumicount :license: AGPLv3 :recipe: /`r-gwpcr `_/`meta.yaml `_ .. conda:package:: r-gwpcr |downloads_r-gwpcr| |docker_r-gwpcr| :versions: .. raw:: html
1.0.4-51.0.4-41.0.4-31.0.4-21.0.4-11.0.4-01.0.3-01.0.2-01.0-0 ``1.0.4-5``,  ``1.0.4-4``,  ``1.0.4-3``,  ``1.0.4-2``,  ``1.0.4-1``,  ``1.0.4-0``,  ``1.0.3-0``,  ``1.0.2-0``,  ``1.0-0``,  ``0.9.11-2``,  ``0.9.11-1``,  ``0.9.11-0``,  ``0.9.10-4``,  ``0.9.10-3``,  ``0.9.10-2``,  ``0.9.10-1``,  ``0.9.10-0``,  ``0.9.9-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends r-akima: :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-data.table: :depends r-statmod: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install r-gwpcr and update with:: mamba update r-gwpcr To create a new environment, run:: mamba create --name myenvname r-gwpcr with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/r-gwpcr: (see `r-gwpcr/tags`_ for valid values for ````) .. |downloads_r-gwpcr| image:: https://img.shields.io/conda/dn/bioconda/r-gwpcr.svg?style=flat :target: https://anaconda.org/bioconda/r-gwpcr :alt: (downloads) .. |docker_r-gwpcr| image:: https://quay.io/repository/biocontainers/r-gwpcr/status :target: https://quay.io/repository/biocontainers/r-gwpcr .. _`r-gwpcr/tags`: https://quay.io/repository/biocontainers/r-gwpcr?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-gwpcr/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r-gwpcr/README.html