:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r-r0' .. highlight: bash r-r0 ==== .. conda:recipe:: r-r0 :replaces_section_title: :noindex: Estimation of R0 and Real\-Time Reproduction Number from Epidemics. :homepage: https://CRAN.R-project.org/package=R0 :license: GPL2 / GPL-2 :recipe: /`r-r0 `_/`meta.yaml `_ .. conda:package:: r-r0 |downloads_r-r0| |docker_r-r0| :versions: ``1.2_6-2``,  ``1.2_6-1``,  ``1.2_6-0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-mass: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install r-r0 and update with:: mamba update r-r0 To create a new environment, run:: mamba create --name myenvname r-r0 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/r-r0: (see `r-r0/tags`_ for valid values for ````) .. |downloads_r-r0| image:: https://img.shields.io/conda/dn/bioconda/r-r0.svg?style=flat :target: https://anaconda.org/bioconda/r-r0 :alt: (downloads) .. |docker_r-r0| image:: https://quay.io/repository/biocontainers/r-r0/status :target: https://quay.io/repository/biocontainers/r-r0 .. _`r-r0/tags`: https://quay.io/repository/biocontainers/r-r0?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-r0/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r-r0/README.html