:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'r2r' .. highlight: bash r2r === .. conda:recipe:: r2r :replaces_section_title: :noindex: software to speed depiction of aesthetic consensus RNA secondary structures :homepage: http://breaker.research.yale.edu/R2R/ :license: GPL-2 :recipe: /`r2r `_/`meta.yaml `_ .. conda:package:: r2r |downloads_r2r| |docker_r2r| :versions: .. raw:: html
1.0.6-41.0.6-31.0.6-21.0.6-11.0.6-01.0.5-31.0.5-21.0.5-11.0.5-0 ``1.0.6-4``,  ``1.0.6-3``,  ``1.0.6-2``,  ``1.0.6-1``,  ``1.0.6-0``,  ``1.0.5-3``,  ``1.0.5-2``,  ``1.0.5-1``,  ``1.0.5-0``,  ``1.0.4-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends perl: ``>=5.32.1,<5.33.0a0 *_perl5`` :depends perl-clone: ``0.46.*`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install r2r and update with:: mamba update r2r To create a new environment, run:: mamba create --name myenvname r2r with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/r2r: (see `r2r/tags`_ for valid values for ````) .. |downloads_r2r| image:: https://img.shields.io/conda/dn/bioconda/r2r.svg?style=flat :target: https://anaconda.org/bioconda/r2r :alt: (downloads) .. |docker_r2r| image:: https://quay.io/repository/biocontainers/r2r/status :target: https://quay.io/repository/biocontainers/r2r .. _`r2r/tags`: https://quay.io/repository/biocontainers/r2r?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r2r/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/r2r/README.html