:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'racon' .. highlight: bash racon ===== .. conda:recipe:: racon :replaces_section_title: :noindex: Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. :homepage: https://github.com/lbcb-sci/racon :documentation: https://github.com/lbcb-sci/racon/blob/1.5.0/README.md :license: MIT / MIT :recipe: /`racon `_/`meta.yaml `_ :links: biotools: :biotools:`Racon`, usegalaxy-eu: :usegalaxy-eu:`racon` .. conda:package:: racon |downloads_racon| |docker_racon| :versions: .. raw:: html
1.5.0-61.5.0-51.5.0-41.5.0-31.5.0-21.5.0-11.5.0-01.4.20-21.4.20-1 ``1.5.0-6``,  ``1.5.0-5``,  ``1.5.0-4``,  ``1.5.0-3``,  ``1.5.0-2``,  ``1.5.0-1``,  ``1.5.0-0``,  ``1.4.20-2``,  ``1.4.20-1``,  ``1.4.20-0``,  ``1.4.13-0``,  ``1.4.12-0``,  ``1.4.11-0``,  ``1.4.10-0``,  ``1.4.7-0``,  ``1.4.3-0``,  ``1.4.2-0``,  ``1.4.0-0``,  ``1.3.3-1``,  ``1.3.2-1``,  ``1.3.2-0``,  ``1.3.1-5``,  ``1.3.1-4``,  ``1.3.1-1``,  ``1.3.1-0``,  ``1.3.0-1``,  ``1.2.1-1``,  ``1.2.0-1``,  ``1.2.0-0``,  ``1.1.0-0``,  ``1.0.1-0``,  ``1.0.0-1``,  ``1.0.0-0``,  ``0.5.0-2``,  ``0.5.0-1``,  ``0.5.0-0`` .. raw:: html
:depends libgcc: ``>=13`` :depends libstdcxx: ``>=13`` :depends libzlib: ``>=1.3.1,<2.0a0`` :depends python: :requirements: :additional platforms: .. raw:: html linux-aarch64osx-arm64 .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install racon and update with:: mamba update racon To create a new environment, run:: mamba create --name myenvname racon with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/racon: (see `racon/tags`_ for valid values for ````) .. |downloads_racon| image:: https://img.shields.io/conda/dn/bioconda/racon.svg?style=flat :target: https://anaconda.org/bioconda/racon :alt: (downloads) .. |docker_racon| image:: https://quay.io/repository/biocontainers/racon/status :target: https://quay.io/repository/biocontainers/racon .. _`racon/tags`: https://quay.io/repository/biocontainers/racon?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/racon/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/racon/README.html