:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'raven-assembler' .. highlight: bash raven-assembler =============== .. conda:recipe:: raven-assembler :replaces_section_title: :noindex: Raven is an assembler for raw reads generated by the third generation sequencing. :homepage: https://github.com/lbcb-sci/raven :license: MIT :recipe: /`raven-assembler `_/`meta.yaml `_ .. conda:package:: raven-assembler |downloads_raven-assembler| |docker_raven-assembler| :versions: .. raw:: html
1.8.3-01.8.2-01.8.1-31.8.1-21.8.1-11.8.1-01.8.0-01.7.0-11.7.0-0 ``1.8.3-0``,  ``1.8.2-0``,  ``1.8.1-3``,  ``1.8.1-2``,  ``1.8.1-1``,  ``1.8.1-0``,  ``1.8.0-0``,  ``1.7.0-1``,  ``1.7.0-0``,  ``1.6.1-0``,  ``1.6.0-0``,  ``1.5.3-0``,  ``1.5.1-0``,  ``1.5.0-1``,  ``1.5.0-0``,  ``1.4.0-0``,  ``1.3.0-0``,  ``1.2.2-0``,  ``1.1.10-0``,  ``1.1.9-0``,  ``1.1.5-0``,  ``0.0.8-0``,  ``0.0.7-0``,  ``0.0.5-0``,  ``0.0.1-0``,  ``0.0.0-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends zlib: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install raven-assembler and update with:: mamba update raven-assembler To create a new environment, run:: mamba create --name myenvname raven-assembler with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/raven-assembler: (see `raven-assembler/tags`_ for valid values for ````) .. |downloads_raven-assembler| image:: https://img.shields.io/conda/dn/bioconda/raven-assembler.svg?style=flat :target: https://anaconda.org/bioconda/raven-assembler :alt: (downloads) .. |docker_raven-assembler| image:: https://quay.io/repository/biocontainers/raven-assembler/status :target: https://quay.io/repository/biocontainers/raven-assembler .. _`raven-assembler/tags`: https://quay.io/repository/biocontainers/raven-assembler?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/raven-assembler/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/raven-assembler/README.html