:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'rdp-readseq' .. highlight: bash rdp-readseq =========== .. conda:recipe:: rdp-readseq :replaces_section_title: :noindex: Java based common sequence file format reader and sequence file manipulation. :homepage: https://github.com/rdpstaff/ReadSeq :license: GPL :recipe: /`rdp-readseq `_/`meta.yaml `_ .. conda:package:: rdp-readseq |downloads_rdp-readseq| |docker_rdp-readseq| :versions: ``2.0.2-1``,  ``2.0.2-0`` :depends openjdk: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install rdp-readseq and update with:: mamba update rdp-readseq To create a new environment, run:: mamba create --name myenvname rdp-readseq with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/rdp-readseq: (see `rdp-readseq/tags`_ for valid values for ````) .. |downloads_rdp-readseq| image:: https://img.shields.io/conda/dn/bioconda/rdp-readseq.svg?style=flat :target: https://anaconda.org/bioconda/rdp-readseq :alt: (downloads) .. |docker_rdp-readseq| image:: https://quay.io/repository/biocontainers/rdp-readseq/status :target: https://quay.io/repository/biocontainers/rdp-readseq .. _`rdp-readseq/tags`: https://quay.io/repository/biocontainers/rdp-readseq?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/rdp-readseq/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/rdp-readseq/README.html