:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'rust-bio-tools'
.. highlight: bash

rust-bio-tools
==============

.. conda:recipe:: rust-bio-tools
   :replaces_section_title:
   :noindex:

   A growing collection of fast and secure command line utilities for dealing with NGS data
   implemented on top of Rust\-Bio.


   :homepage: https://github.com/rust-bio/rust-bio-tools
   :license: MIT / MIT
   :recipe: /`rust-bio-tools <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/rust-bio-tools>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/rust-bio-tools/meta.yaml>`_

   


.. conda:package:: rust-bio-tools

   |downloads_rust-bio-tools| |docker_rust-bio-tools|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>0.42.2-1</code>,  <code>0.42.2-0</code>,  <code>0.42.1-0</code>,  <code>0.42.0-0</code>,  <code>0.41.0-1</code>,  <code>0.41.0-0</code>,  <code>0.40.0-1</code>,  <code>0.40.0-0</code>,  <code>0.39.1-0</code>,  </span></summary>
      

      ``0.42.2-1``,  ``0.42.2-0``,  ``0.42.1-0``,  ``0.42.0-0``,  ``0.41.0-1``,  ``0.41.0-0``,  ``0.40.0-1``,  ``0.40.0-0``,  ``0.39.1-0``,  ``0.39.0-1``,  ``0.39.0-0``,  ``0.38.3-1``,  ``0.38.3-0``,  ``0.38.2-1``,  ``0.38.2-0``,  ``0.38.1-0``,  ``0.38.0-0``,  ``0.37.0-0``,  ``0.36.0-0``,  ``0.35.0-0``,  ``0.34.0-0``,  ``0.33.1-0``,  ``0.33.0-0``,  ``0.32.0-0``,  ``0.31.0-0``,  ``0.30.2-0``,  ``0.30.1-0``,  ``0.30.0-0``,  ``0.29.0-1``,  ``0.29.0-0``,  ``0.28.0-0``,  ``0.27.0-0``,  ``0.26.1-0``,  ``0.26.0-0``,  ``0.25.0-0``,  ``0.24.1-0``,  ``0.24.0-0``,  ``0.23.0-0``,  ``0.22.0-0``,  ``0.21.1-0``,  ``0.21.0-0``,  ``0.20.5-0``,  ``0.20.4-0``,  ``0.20.3-4``,  ``0.20.3-3``,  ``0.20.3-2``,  ``0.20.3-1``,  ``0.20.3-0``,  ``0.20.2-0``,  ``0.20.1-1``,  ``0.20.1-0``,  ``0.20.0-0``,  ``0.19.6-0``,  ``0.19.5-0``,  ``0.19.4-0``,  ``0.19.3-0``,  ``0.19.2-0``,  ``0.19.1-0``,  ``0.19.0-0``,  ``0.18.1-0``,  ``0.18.0-0``,  ``0.17.0-0``,  ``0.16.0-0``,  ``0.15.1-0``,  ``0.15.0-0``,  ``0.14.3-0``,  ``0.14.2-0``,  ``0.14.1-0``,  ``0.14.0-0``,  ``0.13.0-0``,  ``0.12.2-0``,  ``0.12.1-0``,  ``0.11.0-0``,  ``0.10.3-0``,  ``0.10.2-0``,  ``0.10.1-0``,  ``0.10.0-0``,  ``0.9.2-1``,  ``0.9.2-0``,  ``0.9.1-0``,  ``0.9.0-0``,  ``0.8.2-0``,  ``0.8.1-0``,  ``0.8.0-1``,  ``0.8.0-0``,  ``0.6.0-0``,  ``0.5.0-0``,  ``0.4.1-0``,  ``0.4.0-0``,  ``0.3.0-0``,  ``0.2.9-0``,  ``0.2.8-0``,  ``0.2.7-0``,  ``0.2.6-1``,  ``0.2.5-1``,  ``0.2.5-0``,  ``0.2.4-0``,  ``0.2.3-0``,  ``0.2.2-0``,  ``0.2.1-0``,  ``0.1.3-0``,  ``0.1.2-0``,  ``0.1.1-0``

      
      .. raw:: html

         </details>
      

   
   :depends gsl: ``>=2.7,<2.8.0a0``
   :depends libcblas: ``>=3.9.0,<4.0a0``
   :depends libgcc-ng: ``>=12``
   :depends libstdcxx-ng: ``>=12``
   :depends openssl: ``>=3.2.1,<4.0a0``
   :depends starcode: 
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install rust-bio-tools

   and update with::

      mamba update rust-bio-tools

  To create a new environment, run::

      mamba create --name myenvname rust-bio-tools

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/rust-bio-tools:<tag>

   (see `rust-bio-tools/tags`_ for valid values for ``<tag>``)


.. |downloads_rust-bio-tools| image:: https://img.shields.io/conda/dn/bioconda/rust-bio-tools.svg?style=flat
   :target: https://anaconda.org/bioconda/rust-bio-tools
   :alt:   (downloads)
.. |docker_rust-bio-tools| image:: https://quay.io/repository/biocontainers/rust-bio-tools/status
   :target: https://quay.io/repository/biocontainers/rust-bio-tools
.. _`rust-bio-tools/tags`: https://quay.io/repository/biocontainers/rust-bio-tools?tab=tags


.. raw:: html

    <script>
        var package = "rust-bio-tools";
        var versions = ["0.42.2","0.42.2","0.42.1","0.42.0","0.41.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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