:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'seqerakit' .. highlight: bash seqerakit ========= .. conda:recipe:: seqerakit :replaces_section_title: :noindex: Automate creation of Seqera Platform resources :homepage: https://github.com/seqeralabs/seqera-kit :license: Apache-2.0 :recipe: /`seqerakit `_/`meta.yaml `_ .. conda:package:: seqerakit |downloads_seqerakit| |docker_seqerakit| :versions: ``0.4.8-0``,  ``0.4.7-0``,  ``0.4.6-0``,  ``0.4.5-0``,  ``0.4.4-0``,  ``0.4.3-0``,  ``0.4.2-0``,  ``0.4.1-0`` :depends python: ``>=3.8,<4.0`` :depends pyyaml: ``>=6.0.0`` :depends tower-cli: ``>=0.9.0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install seqerakit and update with:: mamba update seqerakit To create a new environment, run:: mamba create --name myenvname seqerakit with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/seqerakit: (see `seqerakit/tags`_ for valid values for ````) .. |downloads_seqerakit| image:: https://img.shields.io/conda/dn/bioconda/seqerakit.svg?style=flat :target: https://anaconda.org/bioconda/seqerakit :alt: (downloads) .. |docker_seqerakit| image:: https://quay.io/repository/biocontainers/seqerakit/status :target: https://quay.io/repository/biocontainers/seqerakit .. _`seqerakit/tags`: https://quay.io/repository/biocontainers/seqerakit?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/seqerakit/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/seqerakit/README.html