:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'simwalk2' .. highlight: bash simwalk2 ======== .. conda:recipe:: simwalk2 :replaces_section_title: :noindex: Stochastic Statistical Analysis of Qualitative Traits :homepage: http://www.genetics.ucla.edu/software/ :license: INDIVIDUAL :recipe: /`simwalk2 `_/`meta.yaml `_ .. conda:package:: simwalk2 |downloads_simwalk2| |docker_simwalk2| :versions: ``2.91-6``,  ``2.91-5``,  ``2.91-4``,  ``2.91-3``,  ``2.91-2``,  ``2.91-1``,  ``2.91-0`` :depends libgcc-ng: ``>=12`` :depends libgfortran-ng: :depends libgfortran5: ``>=12.2.0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install simwalk2 and update with:: mamba update simwalk2 To create a new environment, run:: mamba create --name myenvname simwalk2 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/simwalk2: (see `simwalk2/tags`_ for valid values for ````) .. |downloads_simwalk2| image:: https://img.shields.io/conda/dn/bioconda/simwalk2.svg?style=flat :target: https://anaconda.org/bioconda/simwalk2 :alt: (downloads) .. |docker_simwalk2| image:: https://quay.io/repository/biocontainers/simwalk2/status :target: https://quay.io/repository/biocontainers/simwalk2 .. _`simwalk2/tags`: https://quay.io/repository/biocontainers/simwalk2?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/simwalk2/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/simwalk2/README.html