:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'tabixpp' .. highlight: bash tabixpp ======= .. conda:recipe:: tabixpp :replaces_section_title: :noindex: A C\+\+ wrapper around the tabix project\, a generic indexer for TAB\-delimited genome position files. :homepage: https://github.com/vcflib/tabixpp :license: MIT / MIT :recipe: /`tabixpp `_/`meta.yaml `_ :links: biotools: :biotools:`tabixpp` .. conda:package:: tabixpp |downloads_tabixpp| |docker_tabixpp| :versions: .. raw:: html
1.1.2-21.1.2-11.1.2-01.1.0-131.1.0-121.1.0-111.1.0-101.1.0-91.1.0-8 ``1.1.2-2``,  ``1.1.2-1``,  ``1.1.2-0``,  ``1.1.0-13``,  ``1.1.0-12``,  ``1.1.0-11``,  ``1.1.0-10``,  ``1.1.0-9``,  ``1.1.0-8``,  ``1.1.0-7``,  ``1.1.0-6``,  ``1.1.0-5``,  ``1.1.0-4``,  ``1.1.0-3``,  ``1.1.0-2``,  ``1.1.0-1``,  ``1.1.0-0`` .. raw:: html
:depends bzip2: ``>=1.0.8,<2.0a0`` :depends htslib: ``>=1.19.1,<1.20.0a0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends samtools: :depends xz: ``>=5.2.6,<6.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install tabixpp and update with:: mamba update tabixpp To create a new environment, run:: mamba create --name myenvname tabixpp with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/tabixpp: (see `tabixpp/tags`_ for valid values for ````) .. |downloads_tabixpp| image:: https://img.shields.io/conda/dn/bioconda/tabixpp.svg?style=flat :target: https://anaconda.org/bioconda/tabixpp :alt: (downloads) .. |docker_tabixpp| image:: https://quay.io/repository/biocontainers/tabixpp/status :target: https://quay.io/repository/biocontainers/tabixpp .. _`tabixpp/tags`: https://quay.io/repository/biocontainers/tabixpp?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/tabixpp/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/tabixpp/README.html