:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'thesias' .. highlight: bash thesias ======= .. conda:recipe:: thesias :replaces_section_title: :noindex: Testing Haplotype Effects In Association Studies :homepage: https://github.com/daissi/thesias :license: GPL-3+ :recipe: /`thesias `_/`meta.yaml `_ :links: biotools: :biotools:`THESIAS`, doi: :doi:`10.1093/bioinformatics/btm058` .. conda:package:: thesias |downloads_thesias| |docker_thesias| :versions: ``3.1.1-5``,  ``3.1.1-4``,  ``3.1.1-3``,  ``3.1.1-2``,  ``3.1.1-1``,  ``3.1.1-0`` :depends libgcc-ng: ``>=12`` :depends openjdk: ``>=11`` :depends python: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install thesias and update with:: mamba update thesias To create a new environment, run:: mamba create --name myenvname thesias with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/thesias: (see `thesias/tags`_ for valid values for ````) .. |downloads_thesias| image:: https://img.shields.io/conda/dn/bioconda/thesias.svg?style=flat :target: https://anaconda.org/bioconda/thesias :alt: (downloads) .. |docker_thesias| image:: https://quay.io/repository/biocontainers/thesias/status :target: https://quay.io/repository/biocontainers/thesias .. _`thesias/tags`: https://quay.io/repository/biocontainers/thesias?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/thesias/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/thesias/README.html