:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'ucsc-fatotwobit' .. highlight: bash ucsc-fatotwobit =============== .. conda:recipe:: ucsc-fatotwobit :replaces_section_title: :noindex: Convert DNA from fasta to 2bit format. :homepage: https://hgdownload.cse.ucsc.edu/admin/exe :documentation: https://github.com/ucscGenomeBrowser/kent/blob/v482_base/README :developer docs: https://github.com/ucscGenomeBrowser/kent :license: Varies; see https://genome.ucsc.edu/license :recipe: /`ucsc-fatotwobit `_/`meta.yaml `_ :links: biotools: :biotools:`UCSC_Genome_Browser_Utilities`, doi: :doi:`10.1093/bib/bbs038` .. conda:package:: ucsc-fatotwobit |downloads_ucsc-fatotwobit| |docker_ucsc-fatotwobit| :versions: .. raw:: html
482-0480-0472-1472-0469-2469-1469-0455-2455-1 ``482-0``,  ``480-0``,  ``472-1``,  ``472-0``,  ``469-2``,  ``469-1``,  ``469-0``,  ``455-2``,  ``455-1``,  ``455-0``,  ``447-0``,  ``377-5``,  ``377-4``,  ``377-3``,  ``377-2``,  ``377-1``,  ``366-1``,  ``366-0``,  ``357-4``,  ``357-3``,  ``357-2``,  ``357-1``,  ``357-0``,  ``353-0``,  ``332-0``,  ``324-2``,  ``324-0`` .. raw:: html
:depends bzip2: ``>=1.0.8,<2.0a0`` :depends libgcc: ``>=13`` :depends liblzma: ``>=5.8.1,<6.0a0`` :depends libopenssl-static: :depends libpng: ``>=1.6.49,<1.7.0a0`` :depends libuuid: ``>=2.38.1,<3.0a0`` :depends libzlib: ``>=1.3.1,<2.0a0`` :depends mysql-connector-c: ``>=6.1.11,<6.1.12.0a0`` :requirements: :additional platforms: .. raw:: html linux-aarch64osx-arm64 .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install ucsc-fatotwobit and update with:: mamba update ucsc-fatotwobit To create a new environment, run:: mamba create --name myenvname ucsc-fatotwobit with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/ucsc-fatotwobit: (see `ucsc-fatotwobit/tags`_ for valid values for ````) .. |downloads_ucsc-fatotwobit| image:: https://img.shields.io/conda/dn/bioconda/ucsc-fatotwobit.svg?style=flat :target: https://anaconda.org/bioconda/ucsc-fatotwobit :alt: (downloads) .. |docker_ucsc-fatotwobit| image:: https://quay.io/repository/biocontainers/ucsc-fatotwobit/status :target: https://quay.io/repository/biocontainers/ucsc-fatotwobit .. _`ucsc-fatotwobit/tags`: https://quay.io/repository/biocontainers/ucsc-fatotwobit?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ucsc-fatotwobit/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/ucsc-fatotwobit/README.html