:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'ucsc-twobitinfo' .. highlight: bash ucsc-twobitinfo =============== .. conda:recipe:: ucsc-twobitinfo :replaces_section_title: :noindex: get information about sequences in a .2bit file :homepage: http://hgdownload.cse.ucsc.edu/admin/exe/ :license: varies; see http://genome.ucsc.edu/license :recipe: /`ucsc-twobitinfo `_/`meta.yaml `_ .. conda:package:: ucsc-twobitinfo |downloads_ucsc-twobitinfo| |docker_ucsc-twobitinfo| :versions: .. raw:: html
455-0447-0377-3377-2377-1377-0366-0357-2357-1 ``455-0``,  ``447-0``,  ``377-3``,  ``377-2``,  ``377-1``,  ``377-0``,  ``366-0``,  ``357-2``,  ``357-1``,  ``357-0``,  ``332-0``,  ``324-0`` .. raw:: html
:depends libgcc-ng: ``>=12`` :depends libpng: :depends libstdcxx-ng: ``>=12`` :depends libuuid: :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends mysql-connector-c: ``>=6.1.11,<6.1.12.0a0`` :depends openssl: ``>=3.2.0,<4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install ucsc-twobitinfo and update with:: mamba update ucsc-twobitinfo To create a new environment, run:: mamba create --name myenvname ucsc-twobitinfo with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/ucsc-twobitinfo: (see `ucsc-twobitinfo/tags`_ for valid values for ````) .. |downloads_ucsc-twobitinfo| image:: https://img.shields.io/conda/dn/bioconda/ucsc-twobitinfo.svg?style=flat :target: https://anaconda.org/bioconda/ucsc-twobitinfo :alt: (downloads) .. |docker_ucsc-twobitinfo| image:: https://quay.io/repository/biocontainers/ucsc-twobitinfo/status :target: https://quay.io/repository/biocontainers/ucsc-twobitinfo .. _`ucsc-twobitinfo/tags`: https://quay.io/repository/biocontainers/ucsc-twobitinfo?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ucsc-twobitinfo/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/ucsc-twobitinfo/README.html