check_deprecation¶

Deprecated packages and syntax

Classes

`deprecated_numpy_spec`(_linter)	The recipe contains a deprecated numpy spec
`uses_javajdk`(_linter)	The recipe uses `java-jdk`
`uses_matplotlib`(_linter)	The recipe uses `matplotlib`, but `matplotlib-base` is recommended
`uses_perl_threaded`(_linter)	The recipe uses `perl-threaded`

Documentation

class bioconda_utils.lint.check_deprecation.deprecated_numpy_spec(_linter)[source]¶

The recipe contains a deprecated numpy spec

Please remove the x.x - pinning is now handled automatically.

check_deps(deps)[source]¶

Execute check on recipe dependencies

Example format for deps:

{
  'setuptools': ['requirements/run',
                 'outputs/0/requirements/run/1'],
  'compiler_cxx': ['requirements/build/0']
}

You can use the values in the list directly as section parameter to self.message().

Parameters: deps – Dictionary mapping requirements occurring in the recipe to their locations within the recipe.

class bioconda_utils.lint.check_deprecation.uses_javajdk(_linter)[source]¶

The recipe uses java-jdk

Please use openjdk instead.

check_deps(deps)[source]¶

Execute check on recipe dependencies

Example format for deps:

{
  'setuptools': ['requirements/run',
                 'outputs/0/requirements/run/1'],
  'compiler_cxx': ['requirements/build/0']
}

You can use the values in the list directly as section parameter to self.message().

Parameters: deps – Dictionary mapping requirements occurring in the recipe to their locations within the recipe.

class bioconda_utils.lint.check_deprecation.uses_matplotlib(_linter)[source]¶

The recipe uses matplotlib, but matplotlib-base is recommended

The matplotlib dependency should be replaced with matplotlib-base unless the package explicitly needs the PyQt interactive plotting backend.

check_deps(deps)[source]¶

Execute check on recipe dependencies

Example format for deps:

{
  'setuptools': ['requirements/run',
                 'outputs/0/requirements/run/1'],
  'compiler_cxx': ['requirements/build/0']
}

You can use the values in the list directly as section parameter to self.message().

Parameters: deps – Dictionary mapping requirements occurring in the recipe to their locations within the recipe.

class bioconda_utils.lint.check_deprecation.uses_perl_threaded(_linter)[source]¶

The recipe uses perl-threaded

Please use perl instead.

check_deps(deps)[source]¶

Execute check on recipe dependencies

Example format for deps:

{
  'setuptools': ['requirements/run',
                 'outputs/0/requirements/run/1'],
  'compiler_cxx': ['requirements/build/0']
}

You can use the values in the list directly as section parameter to self.message().

Parameters: deps – Dictionary mapping requirements occurring in the recipe to their locations within the recipe.