recipe bioconductor-celltree

Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/cellTree.html

License:

Artistic-2.0

Recipe:

/bioconductor-celltree/meta.yaml

This packages computes a Latent Dirichlet Allocation (LDA) model of single-cell RNA-seq data and builds a compact tree modelling the relationship between individual cells over time or space.

package bioconductor-celltree

(downloads) docker_bioconductor-celltree

Versions:
1.27.0-01.24.0-01.22.0-01.20.0-11.20.0-01.19.0-01.17.0-01.16.0-01.14.0-1

1.27.0-01.24.0-01.22.0-01.20.0-11.20.0-01.19.0-01.17.0-01.16.0-01.14.0-11.12.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-celltree

and update with:

conda update bioconductor-celltree

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-celltree:<tag>

(see bioconductor-celltree/tags for valid values for <tag>)

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