recipe bioconductor-celltree

Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure

Homepage

https://bioconductor.org/packages/3.11/bioc/html/cellTree.html

License

Artistic-2.0

Recipe

/bioconductor-celltree/meta.yaml

This packages computes a Latent Dirichlet Allocation (LDA) model of single-cell RNA-seq data and builds a compact tree modelling the relationship between individual cells over time or space.

package bioconductor-celltree

(downloads) docker_bioconductor-celltree

Versions

1.17.0-01.16.0-01.14.0-11.12.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-celltree

and update with:

conda update bioconductor-celltree

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-celltree:<tag>

(see bioconductor-celltree/tags for valid values for <tag>)