-
recipe
bioconductor-chimera¶ This package facilitates the characterisation of fusion products events. It allows to import fusion data results from the following fusion finders: chimeraScan, bellerophontes, deFuse, FusionFinder, FusionHunter, mapSplice, tophat-fusion, FusionMap, STAR, Rsubread, fusionCatcher.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/chimera.html
- License
Artistic-2.0
- Recipe
-
package
bioconductor-chimera¶ 
- Versions
1.24.0-0, 1.22.0-0, 1.20.0-0
- Depends bioconductor-annotationdbi
>=1.44.0,<1.45.0
- Depends bioconductor-biobase
>=2.42.0,<2.43.0
- Depends bioconductor-bsgenome.hsapiens.ucsc.hg19
>=1.4.0,<1.5.0
- Depends bioconductor-genomicalignments
>=1.18.0,<1.19.0
- Depends bioconductor-genomicranges
>=1.34.0,<1.35.0
- Depends bioconductor-homo.sapiens
>=1.3.0,<1.4.0
- Depends bioconductor-rsamtools
>=1.34.0,<1.35.0
- Depends bioconductor-txdb.hsapiens.ucsc.hg19.knowngene
>=3.2.0,<3.3.0
- Depends libgcc-ng
>=7.3.0
- Depends libstdcxx-ng
>=7.3.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-chimera
and update with:
conda update bioconductor-chimera
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-chimera:<tag>
(see bioconductor-chimera/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-chimera/README.html)