recipe bioconductor-deseq

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution

Homepage

https://bioconductor.org/packages/3.9/bioc/html/DESeq.html

License

GPL (>= 3)

Recipe

/bioconductor-deseq/meta.yaml

Links

biotools: deseq

package bioconductor-deseq

(downloads) docker_bioconductor-deseq

Versions

1.36.0-1, 1.34.1-0, 1.34.0-0, 1.32.0-0, 1.30.0-0, 1.28.0-0, 1.24.0-0, 1.22.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-deseq

and update with:

conda update bioconductor-deseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-deseq:<tag>

(see bioconductor-deseq/tags for valid values for <tag>)