recipe bioconductor-expressionnormalizationworkflow

Gene Expression Normalization Workflow

Homepage

https://bioconductor.org/packages/3.12/bioc/html/ExpressionNormalizationWorkflow.html

License

GPL (>=3)

Recipe

/bioconductor-expressionnormalizationworkflow/meta.yaml

An extensive, customized expression normalization workflow incorporating Supervised Normalization of Microarryas(SNM), Surrogate Variable Analysis(SVA) and Principal Variance Component Analysis to identify batch effects and remove them from the expression data to enhance the ability to detect the underlying biological signals.

package bioconductor-expressionnormalizationworkflow

(downloads) docker_bioconductor-expressionnormalizationworkflow

Versions

1.16.0-11.16.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-expressionnormalizationworkflow

and update with:

conda update bioconductor-expressionnormalizationworkflow

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-expressionnormalizationworkflow:<tag>

(see bioconductor-expressionnormalizationworkflow/tags for valid values for <tag>)

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