recipe bioconductor-lvsmirna

Normalization of Agilent miRNA arrays.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/LVSmiRNA.html

License

GPL-2

Recipe

/bioconductor-lvsmirna/meta.yaml

Links

biotools: lvsmirna, doi: 10.1261/rna.2345710

package bioconductor-lvsmirna

(downloads) docker_bioconductor-lvsmirna

Versions

1.32.0-0, 1.30.0-0, 1.28.0-0

Depends bioconductor-affy

>=1.60.0,<1.61.0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-limma

>=3.38.0,<3.39.0

Depends bioconductor-vsn

>=3.50.0,<3.51.0

Depends bioconductor-zlibbioc

>=1.28.0,<1.29.0

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-mass

Depends r-quantreg

Depends r-sparsem

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-lvsmirna

and update with:

conda update bioconductor-lvsmirna

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-lvsmirna:<tag>

(see bioconductor-lvsmirna/tags for valid values for <tag>)