recipe bioconductor-metaarray

1) Data transformation for meta-analysis of microarray Data: Transformation of gene expression data to signed probability scale (MCMC/EM methods) 2) Combined differential expression on raw scale: Weighted Z-score after stabilizing mean-variance relation within platform

Homepage

https://bioconductor.org/packages/3.9/bioc/html/metaArray.html

License

LGPL-2

Recipe

/bioconductor-metaarray/meta.yaml

Links

biotools: metaarray, doi: 10.1186/1471-2105-8-364

package bioconductor-metaarray

(downloads) docker_bioconductor-metaarray

Versions

1.60.0-1, 1.60.0-0, 1.58.0-0, 1.56.0-0, 1.54.0-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-mergemaid

>=2.54.0,<2.55.0

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-metaarray

and update with:

conda update bioconductor-metaarray

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-metaarray:<tag>

(see bioconductor-metaarray/tags for valid values for <tag>)