bioconductor-mmnet

downloads

This package gives the implementations microbiome metabolic network constructing and analyzing. It introduces a unique metagenomic systems biology approach, mapping metagenomic data to the KEGG global metabolic pathway and constructing a systems-level network. The system-level network and the next topological analysis will be of great help to analysis the various functional properties, including regulation and metabolic functionality of the metagenome.

Home http://bioconductor.org/packages/3.5/bioc/html/mmnet.html
Versions 1.13.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mmnet

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mmnet

and update with:

conda update bioconductor-mmnet

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mmnet.