recipe bioconductor-motifrg

Tools for discriminative motif discovery using regression methods

Homepage

https://bioconductor.org/packages/3.9/bioc/html/motifRG.html

License

Artistic-2.0

Recipe

/bioconductor-motifrg/meta.yaml

Links

biotools: motifrg, doi: 10.1093/bioinformatics/btt615

package bioconductor-motifrg

(downloads) docker_bioconductor-motifrg

Versions

1.26.0-0, 1.24.0-0, 1.22.0-0, 1.20.0-0, 1.18.0-0, 1.14.0-0

Depends bioconductor-biostrings

>=2.50.0,<2.51.0

Depends bioconductor-bsgenome

>=1.50.0,<1.51.0

Depends bioconductor-bsgenome.hsapiens.ucsc.hg19

>=1.4.0,<1.5.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-seqlogo

>=1.48.0,<1.49.0

Depends bioconductor-xvector

>=0.22.0,<0.23.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-motifrg

and update with:

conda update bioconductor-motifrg

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-motifrg:<tag>

(see bioconductor-motifrg/tags for valid values for <tag>)