recipe bioconductor-motiv

Motif Identification and Validation

Homepage

https://bioconductor.org/packages/3.11/bioc/html/MotIV.html

License

GPL-2

Recipe

/bioconductor-motiv/meta.yaml

Links

biotools: motiv, doi: 10.1038/nmeth.3252

This package makes use of STAMP for comparing a set of motifs to a given database (e.g. JASPAR). It can also be used to visualize motifs, motif distributions, modules and filter motifs.

package bioconductor-motiv

(downloads) docker_bioconductor-motiv

Versions
1.43.0-01.42.0-01.40.0-11.38.0-01.36.0-01.34.0-11.34.0-01.32.0-11.32.0-0

1.43.0-01.42.0-01.40.0-11.38.0-01.36.0-01.34.0-11.34.0-01.32.0-11.32.0-01.30.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-motiv

and update with:

conda update bioconductor-motiv

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-motiv:<tag>

(see bioconductor-motiv/tags for valid values for <tag>)