recipe bioconductor-motiv

This package makes use of STAMP for comparing a set of motifs to a given database (e.g. JASPAR). It can also be used to visualize motifs, motif distributions, modules and filter motifs.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/MotIV.html

License

GPL-2

Recipe

/bioconductor-motiv/meta.yaml

Links

biotools: motiv, doi: 10.1038/nmeth.3252

package bioconductor-motiv

(downloads) docker_bioconductor-motiv

Versions

1.38.0-0, 1.36.0-0, 1.34.0-1, 1.34.0-0, 1.32.0-1, 1.32.0-0, 1.30.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-motiv

and update with:

conda update bioconductor-motiv

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-motiv:<tag>

(see bioconductor-motiv/tags for valid values for <tag>)