recipe bioconductor-nbsplice

Negative Binomial Models to detect Differential Splicing

Homepage

https://bioconductor.org/packages/3.11/bioc/html/NBSplice.html

License

GPL (>=2)

Recipe

/bioconductor-nbsplice/meta.yaml

The package proposes a differential splicing evaluation method based on isoform quantification. It applies generalized linear models with negative binomial distribution to infer changes in isoform relative expression.

package bioconductor-nbsplice

(downloads) docker_bioconductor-nbsplice

Versions

1.6.0-0, 1.4.0-0, 1.2.1-0, 1.2.0-0, 1.0.6-0, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-nbsplice

and update with:

conda update bioconductor-nbsplice

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-nbsplice:<tag>

(see bioconductor-nbsplice/tags for valid values for <tag>)