recipe bioconductor-ogsa

Outlier Gene Set Analysis

Homepage

https://bioconductor.org/packages/3.10/bioc/html/OGSA.html

License

GPL (== 2)

Recipe

/bioconductor-ogsa/meta.yaml

Links

biotools: ogsa, doi: 10.1109/TCBB.2013.153

OGSA provides a global estimate of pathway deregulation in cancer subtypes by integrating the estimates of significance for individual pathway members that have been identified by outlier analysis.

package bioconductor-ogsa

(downloads) docker_bioconductor-ogsa

Versions

1.16.0-0, 1.14.0-1, 1.12.0-0, 1.10.0-0, 1.8.0-0, 1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ogsa

and update with:

conda update bioconductor-ogsa

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ogsa:<tag>

(see bioconductor-ogsa/tags for valid values for <tag>)