recipe bioconductor-pathprint

Pathway fingerprinting for analysis of gene expression arrays

Homepage

https://bioconductor.org/packages/3.11/bioc/html/pathprint.html

License

GPL

Recipe

/bioconductor-pathprint/meta.yaml

Algorithms to convert a gene expression array provided as an expression table or a GEO reference to a 'pathway fingerprint', a vector of discrete ternary scores representing high (1), low(-1) or insignificant (0) expression in a suite of pathways.

package bioconductor-pathprint

(downloads) docker_bioconductor-pathprint

Versions

1.17.0-01.16.0-01.14.0-11.14.0-01.12.0-01.10.4-01.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pathprint

and update with:

conda update bioconductor-pathprint

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pathprint:<tag>

(see bioconductor-pathprint/tags for valid values for <tag>)