recipe bioconductor-pcagopromoter

This package contains functions to ease the analyses of DNA micro arrays. It utilizes principal component analysis as the initial multivariate analysis, followed by functional interpretation of the principal component dimensions with overrepresentation analysis for GO terms and regulatory interpretations using overrepresentation analysis of predicted transcription factor binding sites with the primo algorithm.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/pcaGoPromoter.html

License

GPL (>= 2)

Recipe

/bioconductor-pcagopromoter/meta.yaml

Links

biotools: pcagopromoter

package bioconductor-pcagopromoter

(downloads) docker_bioconductor-pcagopromoter

Versions

1.28.0-1, 1.26.0-0, 1.24.0-0, 1.22.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pcagopromoter

and update with:

conda update bioconductor-pcagopromoter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pcagopromoter:<tag>

(see bioconductor-pcagopromoter/tags for valid values for <tag>)