-
recipe
bioconductor-pcot2
Principal Coordinates and Hotelling's T-Square method
- Homepage
- License
GPL (>= 2)
- Recipe
- Links
biotools: pcot2, doi: 10.1038/nmeth.3252
PCOT2 is a permutation-based method for investigating changes in the activity of multi-gene networks. It utilizes inter-gene correlation information to detect significant alterations in gene network activities. Currently it can be applied to two-sample comparisons.
-
package
bioconductor-pcot2
¶ -
- Versions
1.58.0-0
,1.56.0-0
,1.54.0-0
,1.52.0-1
,1.50.0-0
,1.48.0-0
,1.46.0-0
,1.44.0-0
- Depends
bioconductor-biobase
>=2.50.0,<2.51.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-pcot2
and update with:
conda update bioconductor-pcot2
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-pcot2:<tag>
(see bioconductor-pcot2/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-pcot2/README.html)