bioconductor-pcot2

downloads

PCOT2 is a permutation-based method for investigating changes in the activity of multi-gene networks. It utilizes inter-gene correlation information to detect significant alterations in gene network activities. Currently it can be applied to two-sample comparisons.

Home http://bioconductor.org/packages/3.6/bioc/html/pcot2.html
Versions 1.44.0, 1.46.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-pcot2

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pcot2

and update with:

conda update bioconductor-pcot2

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-pcot2.