recipe bioconductor-pkgdeptools

Package Dependency Tools

Homepage

https://bioconductor.org/packages/3.11/bioc/html/pkgDepTools.html

License

GPL-2

Recipe

/bioconductor-pkgdeptools/meta.yaml

Links

biotools: pkgdeptools, doi: 10.1038/nmeth.3252

This package provides tools for computing and analyzing dependency relationships among R packages. It provides tools for building a graph-based representation of the dependencies among all packages in a list of CRAN-style package repositories. There are also utilities for computing installation order of a given package. If the RCurl package is available, an estimate of the download size required to install a given package and its dependencies can be obtained.

package bioconductor-pkgdeptools

(downloads) docker_bioconductor-pkgdeptools

Versions

1.54.0-0, 1.52.0-0, 1.50.0-1, 1.48.0-0, 1.46.0-0, 1.44.0-0, 1.42.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pkgdeptools

and update with:

conda update bioconductor-pkgdeptools

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pkgdeptools:<tag>

(see bioconductor-pkgdeptools/tags for valid values for <tag>)