- recipe bioconductor-proteomicsannotationhubdata
Transform public proteomics data resources into Bioconductor Data Structures
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/ProteomicsAnnotationHubData.html
- License
Artistic-2.0
- Recipe
- Links
biotools: proteomicsannotationhubdata, doi: 10.1038/nmeth.3252
These recipes convert a variety and a growing number of public proteomics data sets into easily-used standard Bioconductor data structures.
- package bioconductor-proteomicsannotationhubdata¶
-
- Versions
1.24.0-0
,1.22.0-0
,1.20.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.12.0-0
,1.8.0-0
- Depends
bioconductor-annotationhub
>=3.2.0,<3.3.0
bioconductor-annotationhubdata
>=1.24.0,<1.25.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biostrings
>=2.62.0,<2.63.0
bioconductor-genomeinfodb
>=1.30.0,<1.31.0
bioconductor-msnbase
>=2.20.0,<2.21.0
bioconductor-mzr
>=2.28.0,<2.29.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-proteomicsannotationhubdata
and update with:
conda update bioconductor-proteomicsannotationhubdata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-proteomicsannotationhubdata:<tag>
(see bioconductor-proteomicsannotationhubdata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-proteomicsannotationhubdata/README.html)