recipe bioconductor-psicquic

Proteomics Standard Initiative Common QUery InterfaCe

Homepage

https://bioconductor.org/packages/3.11/bioc/html/PSICQUIC.html

License

Apache License 2.0

Recipe

/bioconductor-psicquic/meta.yaml

Links

biotools: psicquic, doi: 10.1038/nmeth.3252

PSICQUIC is a project within the HUPO Proteomics Standard Initiative (HUPO-PSI). It standardises programmatic access to molecular interaction databases.

package bioconductor-psicquic

Versions

1.25.0-0,  1.24.0-0,  1.22.0-1,  1.20.0-1,  1.20.0-0,  1.18.1-0,  1.16.1-0,  1.14.0-0

Depends

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• bioconductor-biomart >=2.44.0,<2.45.0

• bioconductor-iranges >=2.22.0,<2.23.0

• r-base >=4.0,<4.1.0a0

• r-httr

• r-plyr

• r-rcurl

Required By

• bioconductor-refnet

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-psicquic

and update with:

conda update bioconductor-psicquic

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-psicquic:<tag>

(see bioconductor-psicquic/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-psicquic/README.html)