recipe bioconductor-pulsedsilac

Analysis of pulsed-SILAC quantitative proteomics data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/pulsedSilac.html

License

GPL-3

Recipe

/bioconductor-pulsedsilac/meta.yaml

This package provides several tools for pulsed-SILAC data analysis. Functions are provided to organize the data, calculate isotope ratios, isotope fractions, model protein turnover, compare turnover models, estimate cell growth and estimate isotope recycling. Several visualization tools are also included to do basic data exploration, quality control, condition comparison, individual model inspection and model comparison.

package bioconductor-pulsedsilac

(downloads) docker_bioconductor-pulsedsilac

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pulsedsilac

and update with:

conda update bioconductor-pulsedsilac

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pulsedsilac:<tag>

(see bioconductor-pulsedsilac/tags for valid values for <tag>)