bioconductor-rama

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Robust estimation of cDNA microarray intensities with replicates. The package uses a Bayesian hierarchical model for the robust estimation. Outliers are modeled explicitly using a t-distribution, and the model also addresses classical issues such as design effects, normalization, transformation, and nonconstant variance.

Home http://bioconductor.org/packages/3.6/bioc/html/rama.html
Versions 1.50.0, 1.52.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rama

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rama

and update with:

conda update bioconductor-rama

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-rama.