bioconductor-ramigo

downloads

R interface sending requests to AmiGO visualize, retrieving DAG GO trees, parsing GraphViz DOT format files and exporting GML files for Cytoscape. Deprecated:Also uses RCytoscape to interactively display AmiGO trees in Cytoscape.

Home http://bioconductor.org/packages/3.7/bioc/html/RamiGO.html
Versions 1.22.0, 1.23.0, 1.28.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-ramigo
Links biotools: ramigo

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ramigo

and update with:

conda update bioconductor-ramigo

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-ramigo.