bioconductor-rariant

downloads

The ‘Rariant’ package identifies single nucleotide variants from sequencing data based on the difference of binomially distributed mismatch rates between matched samples.

Home http://bioconductor.org/packages/3.7/bioc/html/Rariant.html
Versions 1.16.0, 1.14.0
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rariant
Links biotools: rariant, doi: 10.1038/nmeth.3252

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rariant

and update with:

conda update bioconductor-rariant

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-rariant.