recipe bioconductor-rgalaxy

Make an R function available in the Galaxy web platform

Homepage

https://bioconductor.org/packages/3.11/bioc/html/RGalaxy.html

License

Artistic-2.0

Recipe

/bioconductor-rgalaxy/meta.yaml

Links

biotools: rgalaxy, doi: 10.1038/nmeth.3252

Given an R function and its manual page, make the documented function available in Galaxy.

package bioconductor-rgalaxy

Versions

1.32.0-0,  1.30.0-0,  1.28.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.1-0,  1.18.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• r-base >=4.0,<4.1.0a0

• r-optparse

• r-roxygen2

• r-xml

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rgalaxy

and update with:

conda update bioconductor-rgalaxy

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rgalaxy:<tag>

(see bioconductor-rgalaxy/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rgalaxy/README.html)