-
recipe
bioconductor-rnaither
¶ Statistical analysis of high-throughput RNAi screens
- Homepage
https://bioconductor.org/packages/3.10/bioc/html/RNAither.html
- License
Artistic-2.0
- Recipe
- Links
biotools: rnaither, doi: 10.1093/bioinformatics/btp014
RNAither analyzes cell-based RNAi screens, and includes quality assessment, customizable normalization and statistical tests, leading to lists of significant genes and biological processes.
-
package
bioconductor-rnaither
¶ -
- Versions
2.34.0-0, 2.32.0-1, 2.30.0-0, 2.28.0-0, 2.24.0-0
- Depends
bioconductor-biomart >=2.42.0,<2.43.0
bioconductor-geneplotter >=1.64.0,<1.65.0
bioconductor-limma >=3.42.0,<3.43.0
bioconductor-prada >=1.62.0,<1.63.0
bioconductor-rankprod >=3.12.0,<3.13.0
bioconductor-splots >=1.52.0,<1.53.0
bioconductor-topgo >=2.37.0,<2.38.0
r-base >=3.6,<3.7.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-rnaither
and update with:
conda update bioconductor-rnaither
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rnaither:<tag>
(see bioconductor-rnaither/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rnaither/README.html)