recipe bioconductor-sapfinder

A package for variant peptides detection and visualization in shotgun proteomics.

Homepage

https://bioconductor.org/packages/3.11/bioc/html/sapFinder.html

License

GPL-2

Recipe

/bioconductor-sapfinder/meta.yaml

sapFinder is developed to automate (1) variation-associated database construction, (2) database searching, (3) post-processing, (4) HTML-based report generation in shotgun proteomics.

package bioconductor-sapfinder

(downloads) docker_bioconductor-sapfinder

Versions

1.26.0-01.24.0-01.22.0-21.22.0-11.22.0-01.20.1-01.20.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sapfinder

and update with:

conda update bioconductor-sapfinder

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sapfinder:<tag>

(see bioconductor-sapfinder/tags for valid values for <tag>)