bioconductor-sc3-scripts

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A set of wrappers for individual components of the SC3 package. Functions R packages are hard to call when building workflows outside of R, so this package adds a set of simple wrappers with robust argument parsing. Intermediate steps are currently mainly serialized R objects, but the ultimate objective is to have language-agnostic intermediate formats allowing composite workflows using a variety of software packages.

Home https://github.com/ebi-gene-expression-group/bioconductor-sc3-scripts
Versions 0.0.2, 0.0.1
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-sc3-scripts
Development https://github.com/ebi-gene-expression-group/bioconductor-sc3-scripts

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sc3-scripts

and update with:

conda update bioconductor-sc3-scripts

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-sc3-scripts.