recipe bioconductor-sigar

Facilitates the joint analysis of high-throughput data from multiple molecular levels. Contains functions for manipulation of objects, various analysis types, and some visualization.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/sigaR.html

License

GPL (>= 2)

Recipe

/bioconductor-sigar/meta.yaml

Links

biotools: sigar, doi: 10.1038/nmeth.3252

package bioconductor-sigar

(downloads) docker_bioconductor-sigar

Versions

1.30.0-0, 1.28.0-0, 1.26.0-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-cghbase

>=1.42.0,<1.43.0

Depends bioconductor-limma

>=3.38.0,<3.39.0

Depends bioconductor-marray

>=1.60.0,<1.61.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-corpcor

>=1.6.2

Depends r-igraph

Depends r-mass

Depends r-mvtnorm

Depends r-penalized

Depends r-quadprog

Depends r-snowfall

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sigar

and update with:

conda update bioconductor-sigar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sigar:<tag>

(see bioconductor-sigar/tags for valid values for <tag>)