- recipe cellrank
CellRank for directed single-cell fate mapping
- Homepage:
- Documentation:
- License:
BSD
- Recipe:
CellRank is a toolkit to uncover cellular dynamics based on Markov state modeling of single-cell data. It contains two main modules: kernels compute cell-cell transition probabilities and estimators generate hypothesis based on these.
- package cellrank¶
-
- Versions:
1.5.1-0
,1.5.0-0
,1.4.0-0
,1.3.1-0
,1.2.0-0
,1.1.0-0
,1.0.0-0
,1.0.0rc12-0
,1.0.0rc10-0
,1.5.1-0
,1.5.0-0
,1.4.0-0
,1.3.1-0
,1.2.0-0
,1.1.0-0
,1.0.0-0
,1.0.0rc12-0
,1.0.0rc10-0
,1.0.0rc9-0
,1.0.0rc8-0
,1.0.0rc7-0
,1.0.0rc6-0
,1.0.0rc4-0
,1.0.0rc2-0
,1.0.0rc0-0
,1.0.0b3-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install cellrank
and update with:
conda update cellrank
or use the docker container:
docker pull quay.io/biocontainers/cellrank:<tag>
(see cellrank/tags for valid values for
<tag>
)
- package cellrank-krylov¶
-
- Versions:
1.5.1-0
,1.5.0-0
,1.4.0-0
,1.3.1-0
,1.2.0-0
,1.1.0-0
,1.0.0-0
,1.0.0rc12-0
,1.0.0rc10-0
,1.5.1-0
,1.5.0-0
,1.4.0-0
,1.3.1-0
,1.2.0-0
,1.1.0-0
,1.0.0-0
,1.0.0rc12-0
,1.0.0rc10-0
,1.0.0rc9-0
,1.0.0rc8-0
,1.0.0rc7-0
,1.0.0rc6-0
,1.0.0rc4-0
,1.0.0rc2-0
,1.0.0rc0-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install cellrank-krylov
and update with:
conda update cellrank-krylov
or use the docker container:
docker pull quay.io/biocontainers/cellrank-krylov:<tag>
(see cellrank-krylov/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/cellrank/README.html)