recipe cgat-core

CGAT : the Computational Genomics Analysis Toolkit

Homepage

https://github.com/cgat-developers/cgat-core

License

MIT / MIT

Recipe

/cgat-core/meta.yaml

package cgatcore

(downloads) docker_cgatcore

Versions

0.5.13-0, 0.5.12-1, 0.5.11-0, 0.5.10-0, 0.5.6-0, 0.5.4-0, 0.5.2-0, 0.5.1-0

Depends coreutils

Depends drmaa

Depends gevent

Depends nomkl

Depends pandas

Depends paramiko

Depends python

>=3.6,<3.7.0a0

Depends pyyaml

Depends ruffus

Depends setuptools

Depends six

Depends sqlalchemy

Depends time

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cgatcore

and update with:

conda update cgatcore

or use the docker container:

docker pull quay.io/biocontainers/cgatcore:<tag>

(see cgatcore/tags for valid values for <tag>)