plantcv

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An image processing package for plant phenotyping.

Home https://plantcv.danforthcenter.org
Versions 3.0.5, 3.0.3
License MIT License
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/plantcv
Documentation https://plantcv.readthedocs.io
Development https://github.com/danforthcenter/plantcv
Links doi: 10.1016/j.molp.2015.06.005, doi: 10.1109/WNYIPW.2016.7904790, doi: 10.7717/peerj.4088, doi: 10.7717/peerj.5727

PlantCV is a Python package for building modular image analysis workflows for plant phenotyping.

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install plantcv

and update with:

conda update plantcv

docker

A Docker container is available at https://quay.io/repository/biocontainers/plantcv.