recipe probamconvert

proBAMconvert is a conversion tool to convert common peptide identification files (mzIdentML, pepXML, mzTAB) to the proBAM or proBED format

Homepage:

https://github.com/Biobix/proBAMconvert

License:

Apache License

Recipe:

/probamconvert/meta.yaml

package probamconvert

Versions:

1.0.2-2,  1.0.2-1,  1.0.1-1,  1.0.0-1,  1.0.0-0

Depends:

• bioservices

• cogent

• icu 58.*

• lxml

• matplotlib

• mysql-python

• numpy

• pysam >=0.9

• pyteomics

• python <3

• xz

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install probamconvert

and update with:

conda update probamconvert

or use the docker container:

docker pull quay.io/biocontainers/probamconvert:<tag>

(see probamconvert/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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