r-blockfest

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An R implementation of an extension of the ‘BayeScan’ software (Foll, 2008) <DOI:10.1534/genetics.108.092221> for codominant markers, adding the option to group individual SNPs into pre-defined blocks. A typical application of this new approach is the identification of genomic regions, genes, or gene sets containing one or more SNPs that evolved under directional selection.

Home https://CRAN.R-project.org/package=BlockFeST
Versions 1.6
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-blockfest
Links doi: 10.1534/genetics.108.092221

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-blockfest

and update with:

conda update r-blockfest

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-blockfest.