r-haplo.stats

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Routines for the analysis of indirectly measured haplotypes. The statistical methods assume that all subjects are unrelated and that haplotypes are ambiguous (due to unknown linkage phase of the genetic markers). The main functions are: haplo.em(), haplo.glm(), haplo.score(), and haplo.power(); all of which have detailed examples in the vignette.

Home http://www.mayo.edu/research/labs/statistical-genetics-genetic-epidemiology/software
Versions 1.7.7
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-haplo.stats

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-haplo.stats

and update with:

conda update r-haplo.stats

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-haplo.stats.