recipe r-metaboanalyst

MetaboAnalystR 2.0 contains the R functions and libraries underlying the popular MetaboAnalyst web server.

Homepage

https://github.com/xia-lab/MetaboAnalystR

License

GPL-3

Recipe

/r-metaboanalyst/meta.yaml

package r-metaboanalyst

Versions

2.0.0-1,  2.0.0-0

Depends

• bioconductor-biocparallel

• bioconductor-camera

• bioconductor-fgsea

• bioconductor-genefilter

• bioconductor-globalancova

• bioconductor-globaltest

• bioconductor-impute

• bioconductor-kegggraph

• bioconductor-keggrest

• bioconductor-limma

• bioconductor-msnbase

• bioconductor-pcamethods

• bioconductor-preprocesscore

• bioconductor-rgraphviz

• bioconductor-siggenes

• bioconductor-sspa

• bioconductor-sva

• bioconductor-xcms

• r-base >=4.0,<4.1.0a0

• r-cairo

• r-car

• r-caret

• r-catools

• r-data.table

• r-e1071

• r-ellipse

• r-fitdistrplus

• r-gplots

• r-hmisc

• r-igraph

• r-lars

• r-lattice

• r-magrittr

• r-metap

• r-pheatmap

• r-plotly

• r-pls

• r-proc

• r-randomforest

• r-rcolorbrewer

• r-rcpp

• r-reshape

• r-reshape2

• r-rjsonio

• r-rocr

• r-rserve

• r-scales

• r-scatterplot3d

• r-som

• r-spls

• r-tibble

• r-tidyverse

• r-xtable

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-metaboanalyst

and update with:

conda update r-metaboanalyst

or use the docker container:

docker pull quay.io/biocontainers/r-metaboanalyst:<tag>

(see r-metaboanalyst/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-metaboanalyst/README.html)