r-polysat

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A collection of tools to handle microsatellite data of any ploidy (and samples of mixed ploidy) where allele copy number is not known in partially heterozygous genotypes.

Home https://cran.r-project.org/web/packages/polysat/index.html
Versions 1.7_3
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/r-polysat

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-polysat

and update with:

conda update r-polysat

docker

A Docker container is available at https://quay.io/repository/biocontainers/r-polysat.