recipe r-probmetab

Provides probability ranking to candidate compounds assigned to masses, with the prior assumption of connected sample and additional previous and spectral information modeled by the user.

Homepage

https://github.com/rsilvabioinfo/ProbMetab

License

GPL (>= 3)

Recipe

/r-probmetab/meta.yaml

package r-probmetab

(downloads) docker_r-probmetab

Versions

1.1-3, 1.1-0, 1.0-2, 1.0-0

Depends bioconductor-camera

1.34.0.*

Depends bioconductor-multtest

Depends bioconductor-mzr

2.6.3.*

Depends bioconductor-rcytoscape

1.27.1.*

Depends libgcc-ng

>=7.3.0

Depends libnetcdf

4.3.3.1.*

Depends libstdcxx-ng

>=7.3.0

Depends r-base

3.4.1.*

Depends r-genenet

Depends r-hwriter

Depends r-rcpp

Depends r-rcpparmadillo

Depends r-rcurl

Depends r-rjson

Depends r-xml

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-probmetab

and update with:

conda update r-probmetab

or use the docker container:

docker pull quay.io/biocontainers/r-probmetab:<tag>

(see r-probmetab/tags for valid values for <tag>)